Anthony,
it's a question for the CCS forum. I doubt anyone in the BIOS team is testing import of CCS3 projects, but I could be wrong. If you want to look for differences between projects that work and the ones that don't, look into Debug/makefile and Debug/subdir_rules.mk. makefile should contain dependency between the out file and $(GEN_CMDS), and subdir_rules.mk should invoke tconf to generate *cfg.cmd file.
Also, try removing manually *cfg.cmd file, if it's still in the Debug directory.
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Forum Post: RE: Migrating DM6437/DM648 DVSDK 1.11 to CCS 5.5: Tconf not invoked?
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